Sunday, December 19, 2010

useful links

http://ycombinator.com/
http://www.reddit.com/
http://www.catb.org/~esr/faqs/hacker-howto.html
http://slashdot.org/
http://www.crunchgear.com/
http://www.wired.com/
http://www.engadget.com/
http://lifehacker.com/
http://techcrunch.com/
http://download.oracle.com/javase/6/docs/api/index.html
http://www.javabeginner.com/

all time fav techrepublic

Saturday, December 18, 2010

Wednesday, December 1, 2010

running batch jobs on talon cluster ----> RepeatMasker

#!/bin/bash
DIR=/users/prm0080/RepeatMasker/RepeatMasker/HMP_Bacteria_ContigCombine2
J=0
K=1
for i in $DIR/*
do
files[$J]=$i
let J=$J+$K
done
#BSUB -J "jobArray[1-560]"
#BSUB -n 1
#BSUB -M 2
#BSUB -e mothur.%J.err output error file; %J=job number
# $LSB_JOBINDEX
#Run the application
/users/prm0080/RepeatMasker/RepeatMasker/RepeatMasker ${files[$LSB_JOBINDEX]} -dir $DIR/suresh/